# Genetics & DNA — Mendel to CRISPR

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Category: Science
Slides: 13
Updated: 2026-05-17T20:55:48.594Z
Tags: catalog, science, genetics

## Summary

DECK / 5'-GENETICS-3' 2026 / SCIENCE // THE MOLECULAR ARCHIVE GENETICS / The Four-Letter Alphabet From a monastery garden to programmable molecules — how four bases (A, T, G, C) became the operating system of life. Key sections include: GENETICS / The Four-Letter Alphabet; Mendel's Peas; The Double Helix; DNA → RNA → Protein; 64 codons → 20 amino acids; The Human Genome Project; "Junk" DNA, reconsidered; Mutations: the source code of variation; PCR: the photocopier of biology; Reading DNA: 100,000× cheaper.

## Slide Outline

1. GENETICS / The Four-Letter Alphabet
2. Mendel's Peas
3. The Double Helix
4. DNA → RNA → Protein
5. 64 codons → 20 amino acids
6. The Human Genome Project
7. "Junk" DNA, reconsidered
8. Mutations: the source code of variation
9. PCR: the photocopier of biology
10. Reading DNA: 100,000× cheaper
11. CRISPR-Cas9 programmable editing
12. The programmable body
13. References & further reading

## Slide Transcript

### Slide 1: GENETICS
/ The Four-Letter
Alphabet

- DECK / 5'-GENETICS-3'
- 2026 / SCIENCE
- // THE MOLECULAR ARCHIVE
- From a monastery garden to programmable molecules — how four bases (A, T, G, C) became the operating system of life.
- 5'ATGCATGAAGAT...3'

### Slide 2: Mendel's Peas

- 02 / FRAME
- 1866 — BRNO
- Frame 02 / Origin
- In an Augustinian monastery in Brno, Gregor Mendel cross-bred 28,000 pea plants and discovered that traits were inherited as discrete particles — not blended liquids.
- Dominant & recessive alleles (3:1 ratios)
- Independent assortment — separate traits
- Particulate inheritance — units, not fluids
- Published 1866. Ignored for 34 years, until rediscovered in 1900
- P × P → F1 → F2
- P: YY × yy (yellow × green)
- F1: Yy Yy Yy Yy (all yellow)
- F2: YY Yy Yy yy → 3 : 1
- A monk's data table that, decades later, would name a science.

### Slide 3: The Double Helix

- 03 / FRAME
- 1953 — CAMBRIDGE
- Frame 03 / Structure
- April 1953, Nature: Watson & Crick publish a one-page paper proposing DNA's antiparallel double helix — built on Rosalind Franklin's X-ray crystallography (Photo 51).
- Two strands wound around a common axis
- Bases pair inside: A↔T, G↔C
- Franklin: the experimental backbone of the discovery
- "It has not escaped our notice…" — replication mechanism implicit

### Slide 4: DNA → RNA → Protein

- 04 / FRAME
- CENTRAL DOGMA
- Frame 04 / Information Flow
- Crick's 1958 "central dogma": genetic information flows in one direction. DNA stores it, RNA transports it, ribosomes translate it into the molecular machines (proteins) that do the work.
- Replication
- DNA → DNA. Polymerases unzip the helix and copy each strand semi-conservatively before cell division.
- ATGC ⇋ TACG
- Transcription
- DNA → mRNA. RNA polymerase reads a gene; thymine (T) becomes uracil (U).
- ATGC → AUGC
- Translation
- mRNA → protein. Ribosomes read codons (3 bases) and chain amino acids into a folded protein.
- AUG = Met · start

### Slide 5: 64 codons
→ 20 amino acids

- 05 / FRAME
- THE CODE
- Frame 05 / Codon Table
- Three-letter words spell every protein in every species. The code is redundant (multiple codons per amino acid) and nearly universal — bacteria, ferns, and humans share it.
- AUG = start codon (Met)
- UAA / UAG / UGA = stop codons
- Cracked 1961–66 by Nirenberg, Khorana, Holley
- AUGMet·M
- UUUPhe
- UUCPhe
- UCUSer
- UCCSer
- UAUTyr
- UAASTOP
- UAGSTOP
- CUULeu
- CUCLeu
- CUALeu
- CCUPro
- CAUHis
- CAAGln
- CGUArg
- CGCArg
- AUUIle
- ACUThr
- AAUAsn
- AAALys
- AGUSer
- AGAArg
- GUUVal
- GCUAla
- GCCAla
- GAUAsp
- GAAGlu
- GGUGly
- GGCGly
- GGAGly
- UGGTrp
- UGASTOP
- Excerpt — 32 of 64 codons shown.

### Slide 6: The Human Genome Project

- 06 / FRAME
- 1990–2003
- Frame 06 / The Atlas
- Thirteen years, 20 institutions, $2.7 billion. Completed in 2003 — a complete reference of human DNA. The biggest surprise wasn't what it contained, but how little.
- 3.0B
- Base pairs in the human genome
- ~20,000
- Protein-coding genes (fewer than expected)
- Of DNA actually codes for proteins
- For comparison: a rice plant has ~32,000 protein-coding genes. Complexity isn't about gene count — it's about regulation.

### Slide 7: "Junk" DNA, reconsidered

- 07 / FRAME
- NON-CODING
- Frame 07 / Reconsidered
- For decades, the 98% of DNA that didn't code for proteins was dismissed as junk. The ENCODE project (2012) and successors have rewritten that story.
- Regulatory elements — promoters, enhancers, silencers
- Non-coding RNA — microRNA, lncRNA, structural RNA
- Transposons — "jumping genes" (~45% of the genome)
- Evolutionary playground — raw material for new genes
- ■ Protein-coding 2%
- ■ Regulatory ~8%
- ■ Introns ~25%
- ■ Repetitive / transposons ~50%
- ■ Other / unknown ~15%

### Slide 8: Mutations: the source code of variation

- 08 / FRAME
- VARIATION
- Frame 08 / Errors as Fuel
- Copy-machine errors in DNA replication generate the raw material for evolution — and most disease. Three flavors:
- Point mutation
- One base swapped for another. Sickle cell: a single A→T changes one amino acid in hemoglobin.
- GAG → GTG
- Frameshift
- Insertion or deletion shifts the reading frame — every codon downstream changes. Often catastrophic.
- ATG CAT GAT
- ↓ ins A
- ATG ACA TGA
- Copy-number
- Whole sections duplicated or deleted. Down syndrome: a third copy of chromosome 21.
- [gene] × 1
- [gene][gene] × 2
- [gene][gene][gene] × 3

### Slide 9: PCR: the photocopier of biology

- 09 / FRAME
- 1983 — MULLIS
- Frame 09 / Amplification
- Driving on Highway 128 in 1983, Kary Mullis sketched a chain reaction that would double DNA every cycle. Thirty cycles → a billion copies of any chosen sequence.
- Denature at 95°C — strands separate
- Anneal at 55°C — primers bind targets
- Extend at 72°C — Taq polymerase copies
- From forensics to COVID tests — every modern lab depends on it
- Electrophoresis Gel
- L1L2L3L4L5L6

### Slide 10: Reading DNA: 100,000× cheaper

- 10 / FRAME
- READ-OUT
- Frame 10 / Sequencing
- Three generations of technology compressed the cost of a human genome from billions to hundreds of dollars in two decades.
- 1977 — SANGER
- Chain-termination method. Read length ~1 kb. Powered the Human Genome Project. ~$1/base.
- 2005 — ILLUMINA / NGS
- Massively parallel short-read sequencing. Billions of reads per run. $1000 genome by ~2014.
- 2015 — NANOPORE / LONG-READ
- Oxford Nanopore: thread DNA through a protein pore, read electrical signals. Pocket-sized. Reads of 100kb+. ~$200 genome today.

### Slide 11: CRISPR-Cas9
programmable editing

- 11 / FRAME
- 2012 — DOUDNA / CHARPENTIER
- Frame 11 / The Edit
- Borrowed from a bacterial immune system: a guide RNA escorts the Cas9 enzyme to a precise location in the genome, where it cuts. Cellular repair finishes the edit.
- 2012 — Doudna & Charpentier reprogram Cas9 in a test tube
- 2020 — Nobel Prize in Chemistry
- 2023 — Casgevy: first FDA-approved CRISPR therapy (sickle cell)
- From decades of work to days of design

### Slide 12: The programmable body

- 12 / FRAME
- FRONTIER
- Frame 12 / What's Next
- Editing went from cutting (CRISPR) to rewriting (base editing) to drafting (prime editing). Genetic medicine is moving from theory to clinic.
- Gene therapies
- One-time treatments for hemophilia, retinal blindness, spinal muscular atrophy. AAV viral vectors deliver corrected genes directly to target cells.
- Base & prime editing
- Rewrite single letters without cutting both strands. Prime editing (Liu, 2019) handles ~89% of known disease-causing mutations.
- Personalized medicine
- Pharmacogenomics tailors drugs to your variants. mRNA vaccines designed in days. Cancer immunotherapies engineered patient by patient.
- Ancestry & populations
- 23andMe-class consumer kits, ancient DNA from 400,000-year-old bones, the rewriting of human prehistory through genomes.
- Synthetic biology
- Designing organisms from scratch. Minimal genomes (Mycoplasma JCVI-syn3.0). Engineered yeast that brews insulin, spider silk, vaccine adjuvants.
- Open questions
- Germline editing ethics. Off-target effects. Equity of access. What does it mean to "fix" a genome?

### Slide 13: References &
further reading

- 13 / END FRAME
- 3'-STOP-5'
- // END OF SEQUENCE
- YouTube — CRISPR gene editing
- YouTube — Double helix · Watson & Crick
- Nature Education — Discovery of DNA structure
- NIH — Human Genome Project archives
- Nobel 2020 — CRISPR (Doudna · Charpentier)
- // FIN — A · T · G · C


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